Chloroplast DB
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Gene View
 
ID   402
Gene name   ycf4
Locus   AnfoCp039
Organism   Anthoceros formosae
Location Start:End   76893:77447
 
Protein   
MNWESEWFRIELIRGSRRISNFFWAFILLSGALGFLSVGLSSYFGKDLISFLSYEQIVFIPQGIVMCFYG
IAGSAFSLYLWGTIFWNIGSGYNKFDKGKGIVCIYRWGFPGKNRRIRIEFSMKDIEAIGMEVQEGFYPRR
TLRLKIKGQQDVPLTYIGENLTLREIEEEAAELARFLQISIEGF
    Run BLAST
 
CDS   
ATGAATTGGGAATCTGAATGGTTTCGAATAGAACTTATAAGGGGATCTTGAAGAATTAGTAATTTTTTTT
GGGCGTTCATTCTTTTGTCAGGGGCACCAGGATTTCCCCCTGTTGGACTTTCCAGTTACTTCGGTAAAGA
TTTAATATCTTTCCTATCGTATGAGTAAATCGTTTTTATTCCATAAGGAATTGTAATGTGCTTTTATGGG
ATTGCTGGTTCTGCCTTTAGCCTTTACTTGTGGGGCACCATCTTCTGGAATATAGGTAGTGGCTATAATA
AATTTGATAAAGGAAAGGGAATTGTTTGTATTTATCGTTGGGGATTTCTCGGTAAAAATCGTCGCATTCG
TATCGAATCCTCTATGAAAGATATCGAAGCTATAGGAATGGAAGTTCAGGAAGGTTTTTATCCTCGTCGC
ACTCTCCGTCTGAAAATCAAAGGTCAACAAGATGTTCCTCTAACTTATATTGGTGAAAACTTAACTTTGA
GAGAAATAGAAGAAGAAGCTGCCGAATTAGCTCGTTTTTTGCAAATATCTATTGAAGGATTTTGA
    Run BLAST
 
mRNA Edited   Edits at following locations: 49 U -> C 98 C -> U 107 C -> U 108 C -> U 109 C -> U 166 U -> C 184 U -> C 329 U -> C 359 C -> U 

                     
                  
 
 
        
 Edited sequence 
AUGAAUUGGGAAUCUGAAUGGUUUCGAAUAGAACUUAUAAGGGGAUCUCGAAGAAUUAGUAAUUUUUUUU
GGGCGUUCAUUCUUUUGUCAGGGGCACUAGGAUUUCUUUCUGUUGGACUUUCCAGUUACUUCGGUAAAGA
UUUAAUAUCUUUCCUAUCGUAUGAGCAAAUCGUUUUUAUUCCACAAGGAAUUGUAAUGUGCUUUUAUGGG
AUUGCUGGUUCUGCCUUUAGCCUUUACUUGUGGGGCACCAUCUUCUGGAAUAUAGGUAGUGGCUAUAAUA
AAUUUGAUAAAGGAAAGGGAAUUGUUUGUAUUUAUCGUUGGGGAUUUCCCGGUAAAAAUCGUCGCAUUCG
UAUCGAAUUCUCUAUGAAAGAUAUCGAAGCUAUAGGAAUGGAAGUUCAGGAAGGUUUUUAUCCUCGUCGC
ACUCUCCGUCUGAAAAUCAAAGGUCAACAAGAUGUUCCUCUAACUUAUAUUGGUGAAAACUUAACUUUGA
GAGAAAUAGAAGAAGAAGCUGCCGAAUUAGCUCGUUUUUUGCAAAUAUCUAUUGAAGGAUUUUGA