Chloroplast DB
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Gene View
 
ID   398
Gene name   ycf10
Locus   AnfoCp040
Organism   Anthoceros formosae
Location Start:End   77577:79103
 
Protein   
MKLYQWQIFRWFFETLNCSLGRAYKASKRIQYIKKDYSFYKNTILFSKGSWQAINLYTNTELRNTLFIIY
WSLLEYRISLCFLNLLRKIESIQFKKLSVISFILNLHSSLSHVNKQLQILSKVLFDRFYFYLWKNMYFSL
LLHNSLSRFVKESIEESEQSGFNNENKKDFQDETYFVLNESLEKDFSRIREMNRKLAWIEVTLNDLNTWK
SYYLFFPFLSEMKNTPQNESSFKLKNFEITTPAYDSTGFIPRSISRTLSRFQIELMGQSSSLVLQEFRSA
KYQALASIQYIGCLIFLPWIISRSLKEWFLEPWIKFWWDTYQSQISLNSFQEERASEGLQEVEEPLWLDK
LVSNFLKNQSQDLNIEIYGETIQLIRMYNENSIQTILHLLTGMICFTTLGALFILGKKRLSVLNSWIQES
FYSLSDTMKAFAILLLTDLCIGFHSPHGWEVVIGSSLEHLGFAHNKHIISCFVSTFPVILDTVSKYWIFR
HLNRISPSIVATYHTMNE
    Run BLAST
 
CDS   
ATGAAATTATATCAGTGGCAAATTCTTCGATGGTTTTTTGAGACTCTAAATTGTTCTTTAGGAAGAGCTT
ATAAGGCTAGCAAAAGAATACAGTATATAAAGAAAGATTATTCATTCTATAAAAATACCATCTTATTTTC
AAAAGGTTCTTGGCAAGCTATAAATCTTTATACGAATACAGAATTGAGAAACACTTTATTTATAATCTAC
TGGAGTCTTTTAGAATATAGAATTAGCCTGTGTTTCTTAAATTTACTAAGGAAAATTGAATTTATTCAAT
TTAAAAAATTATCCGTTATTTCTTTTATTCTTAATTTACATTCATCTCTTTCTCATGTTAACAAACAGCT
TCAAATTCTACCAAAAGTTCTTTTTGATAGATTTTATTTTTATCTTTGGAAAAACATGTATTTTTCCCTT
CTTCTCCACAATTCCCTTTCAAGATTCGTAAAGGAGAGTATAGAAGAATCAGAGCAGAGTGGATTCAACA
ACGAAAACAAAAAAGATTTTCAAGATGAAACTTATTTTGTTTTAAATGAATCCCTTGAGAAAGATTTTAG
TAGAATAAGAGAGATGAATAGAAAATTGGCTTGGATTGAAGTAACTTTAAATGATTTAAATACTTGGAAG
AGTTACTACCTCTTCTTCCCATTTTTATCAGAGATGAAGAATACTCCTCAAAATGAATCTTCTTTTAAGT
TGAAGAATTTTGAAATAACGACTCCAGCTTATGATTCTACAGGTTTTATACTATGTTCCATAAGTCGTAC
TTTATCTAGATTTCAAATAGAATTGATGGGTTAGTCAAGTTCATTGGTACTTCAGGAATTTCGATCAGCT
AAATATCAAGCATTGGCATCTATACAATATATAGGATGTTTAATTTTTCTTCCTCGGATAATTTCCCGCT
CTCTCAAGGAATGGTTTTTGGAACCCTGGATTAAATTTTGGTGGGATACTTATCAATCTTAAATTTCTCT
TAATTCTTTCCAAGAAGAAAGAGCATCAGAAGGGCTTCAAGAAGTCGAAGAACCACTTTGGTTGGATAAA
TTGGTGTCAAATTTTCTGAAAAATCAATCCCAAGACCTTAATATAGAAATTTATGGAGAAACAATTCAAT
TAATAAGAATGTACAATGAAAATAGTATTCAAACCATTTTACATTTATTAACAGGTATGATTTGCTTCAC
TACTTTAGGTGCCTTGTTTATCTTAGGTAAGAAAAGGCTTTCTGTTTTGAATTCCTGGATTCAAGAATCA
TTTTATAGCTTAAGTGATACTATGAAAGCCTTTGCTATTTCTTTATTAACCGATCTATGTATTGGGTTTC
ATCTGCCTCATGGCTGGGAAGTAGTAATAGGTTCTTCTTCAGAACACTTAGGATTTGCTCATAATAAACA
TATAATATCCTGTTTCGTGTCAACTTTTCCGGTTATTTCAGATACAGTTTCTAAATATTGGATTTCTCGT
CATTCGAATCGTATATCTCCTCTAATTGTAGCGACTTATCATACAATGAATGAATAA
    Run BLAST
 
mRNA Edited   Edits at following locations: 25 C -> U 272 U -> C 361 C -> U 752 U -> C 754 U -> C 802 U -> C 895 C -> U 970 U -> C 1300 U -> C 1301 C -> U 1333 C -> U 1334 U -> C 1370 C -> U 1439 C -> U 1466 C -> U 1475 C -> U 1492 C -> U 1493 U -> C 

                     
                  
 
 
        
 Edited sequence 
AUGAAAUUAUAUCAGUGGCAAAUUUUUCGAUGGUUUUUUGAGACUCUAAAUUGUUCUUUAGGAAGAGCUU
AUAAGGCUAGCAAAAGAAUACAGUAUAUAAAGAAAGAUUAUUCAUUCUAUAAAAAUACCAUCUUAUUUUC
AAAAGGUUCUUGGCAAGCUAUAAAUCUUUAUACGAAUACAGAAUUGAGAAACACUUUAUUUAUAAUCUAC
UGGAGUCUUUUAGAAUAUAGAAUUAGCCUGUGUUUCUUAAAUUUACUAAGGAAAAUUGAAUCUAUUCAAU
UUAAAAAAUUAUCCGUUAUUUCUUUUAUUCUUAAUUUACAUUCAUCUCUUUCUCAUGUUAACAAACAGCU
UCAAAUUCUAUCAAAAGUUCUUUUUGAUAGAUUUUAUUUUUAUCUUUGGAAAAACAUGUAUUUUUCCCUU
CUUCUCCACAAUUCCCUUUCAAGAUUCGUAAAGGAGAGUAUAGAAGAAUCAGAGCAGAGUGGAUUCAACA
ACGAAAACAAAAAAGAUUUUCAAGAUGAAACUUAUUUUGUUUUAAAUGAAUCCCUUGAGAAAGAUUUUAG
UAGAAUAAGAGAGAUGAAUAGAAAAUUGGCUUGGAUUGAAGUAACUUUAAAUGAUUUAAAUACUUGGAAG
AGUUACUACCUCUUCUUCCCAUUUUUAUCAGAGAUGAAGAAUACUCCUCAAAAUGAAUCUUCUUUUAAGU
UGAAGAAUUUUGAAAUAACGACUCCAGCUUAUGAUUCUACAGGUUUUAUACCACGUUCCAUAAGUCGUAC
UUUAUCUAGAUUUCAAAUAGAAUUGAUGGGUCAGUCAAGUUCAUUGGUACUUCAGGAAUUUCGAUCAGCU
AAAUAUCAAGCAUUGGCAUCUAUACAAUAUAUAGGAUGUUUAAUUUUUCUUCCUUGGAUAAUUUCCCGCU
CUCUCAAGGAAUGGUUUUUGGAACCCUGGAUUAAAUUUUGGUGGGAUACUUAUCAAUCUCAAAUUUCUCU
UAAUUCUUUCCAAGAAGAAAGAGCAUCAGAAGGGCUUCAAGAAGUCGAAGAACCACUUUGGUUGGAUAAA
UUGGUGUCAAAUUUUCUGAAAAAUCAAUCCCAAGACCUUAAUAUAGAAAUUUAUGGAGAAACAAUUCAAU
UAAUAAGAAUGUACAAUGAAAAUAGUAUUCAAACCAUUUUACAUUUAUUAACAGGUAUGAUUUGCUUCAC
UACUUUAGGUGCCUUGUUUAUCUUAGGUAAGAAAAGGCUUUCUGUUUUGAAUUCCUGGAUUCAAGAAUCA
UUUUAUAGCUUAAGUGAUACUAUGAAAGCCUUUGCUAUUCUUUUAUUAACCGAUCUAUGUAUUGGGUUUC
AUUCGCCUCAUGGCUGGGAAGUAGUAAUAGGUUCUUCUUUAGAACACUUAGGAUUUGCUCAUAAUAAACA
UAUAAUAUCCUGUUUCGUGUCAACUUUUCCGGUUAUUUUAGAUACAGUUUCUAAAUAUUGGAUUUUUCGU
CAUUUGAAUCGUAUAUCUCCUUCAAUUGUAGCGACUUAUCAUACAAUGAAUGAAUAA