Chloroplast DB
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Gene View
 
ID   313
Gene name   psbC
Locus   AnfoCp024
Organism   Anthoceros formosae
Location Start:End   51041:52462
 
Protein   
MKTLYSLRRYYPVETLFNGTLALGGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLF
EVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHSLIGPETL
EESFPFFGYVWKDKNKMTTILGIHLVLLGLGAFLLVFKASFFGGVYDTWAPGGGDVREITNLTLSPSIIF
GYLLKSPFGGEGWIVSVDNLEDIIGGHVWLGLICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGAIS
VFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEII
FGGETMRFWDLRAPWLEPLRGPNGLDLSKLKQDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDSEPVLSMTPLN
    Run BLAST
 
CDS   
ATGAAAACCTTGTATTCCCTGAGGAGGTATTACCCTGTGGAAACGCTCTTTAATGGAACTTTAGCTTTGG
GTGGTCGTGATCAAGAAACCACTGGTTTCGCTTGGTGGGCTGGTAATGCTCGACTTATCAATTTATCTGG
TAAATTATTAGGTGCTCATGTAGCTTATGCTGGCTTGATAGTTTTTTGGGCTGGAGCGATGAATCTATTT
GAAGTGGCTCACTTTGTACCGGAAAAACCCATGTATGAGCAGGGATTAATTTTATTGCCGCATCTAGCTA
CTTTAGGGTGGGGTGTAGGTCCCGGTGGAGAAGTTATCGATACTTTTCCATACTTCGTATCTGGTGTACT
CCATTTAATTTCGTCCGCAGTTTTAGGTTTCGGAGGTATCTATCATTCTCTTATTGGACCAGAAACCTTA
GAAGAATCTTTTCCATTCTTTGGTTATGTATGGAAAGATAAGAATAAAATGACTACTATTCTAGGTATTC
ATCTTGTTTTACTAGGTCTTGGTGCTTCTCTCCTGGTATTCAAGGCTTCATTTTTCGGAGGTGTATACGA
TACCTGGGTTCCTGGTGGTGGAGATGTAAGAGAAATCACAAATCTTACACTTAGTCCGAGTATTATTTTT
GGGTATTTACTCAAGTCACCTTTTGGTGGAGAGGGATGGATTGTTAGTGTGGATAATTTGGAAGATATAA
TCGGCGGACATGTTTGGTTAGGCTTGATTTGTATCCTAGGTGGTATCTGGCATATCTTGACCAAACCCTT
TGCGTGGGCCCGCCGTGCTTTAGTATGGTTCGGAGAAGCCTATCTATCTTATAGTTTAGGCGCTATTTCT
GTTTTTGGTTTCATTGCTTGTTGCTTTGTTTGGTTTAATAACACAGCTTATCCTAGTGAATTTTATGGTC
CTACTGGTCCAGAAGCTTCTCAAGCTCAAGCTTTTACTTTTTTGGTTAGAGACCAACGCCTCGGAGCTAA
TGTAGGTTCTGCCCAAGGACCTACCGGTTTAGGTAAATATCTTATGCGCCCTCCTACTGGAGAAATCATT
TTTGGAGGAGAAACAATGCGCTTTTGGGATCTCCGTGCTCCATGGTTGGAACCTCTAAGAGGTCCCAATG
GCTTAGATTTGAGTAAGTTGAAGCAAGATATACAGCCCTGGCAGGAGTGACGTTCCGCAGAATATATGAC
TCATGCTCCTTTGGGTTCTTTGAATTCTGTAGGTGGAGTAGCTACTGAAATTAATGCAGTAAACTATGTT
TCTCCCCGTAGTTGGTTAGCCACCTCTCATTTTGTATTGGGATTCTTTTTTTTCGTAGGTCACTTGTGGC
ACGCCGGGAGAGCACGTGCAGCTGCAGCTGGATTCGAAAAAGGGATTGATCGTGATTCCGAACCTGTTCT
TTCTATGACACTTCTTAACTAG
    Run BLAST
 
mRNA Edited   Edits at following locations: 36 U -> C 166 U -> C 518 C -> U 569 U -> C 800 U -> C 1030 C -> U 1168 U -> C 1412 U -> C 

                     
                  
 
 
        
 Edited sequence 
AUGAAAACCUUGUAUUCCCUGAGGAGGUAUUACCCCGUGGAAACGCUCUUUAAUGGAACUUUAGCUUUGG
GUGGUCGUGAUCAAGAAACCACUGGUUUCGCUUGGUGGGCUGGUAAUGCUCGACUUAUCAAUUUAUCUGG
UAAAUUAUUAGGUGCUCAUGUAGCUCAUGCUGGCUUGAUAGUUUUUUGGGCUGGAGCGAUGAAUCUAUUU
GAAGUGGCUCACUUUGUACCGGAAAAACCCAUGUAUGAGCAGGGAUUAAUUUUAUUGCCGCAUCUAGCUA
CUUUAGGGUGGGGUGUAGGUCCCGGUGGAGAAGUUAUCGAUACUUUUCCAUACUUCGUAUCUGGUGUACU
CCAUUUAAUUUCGUCCGCAGUUUUAGGUUUCGGAGGUAUCUAUCAUUCUCUUAUUGGACCAGAAACCUUA
GAAGAAUCUUUUCCAUUCUUUGGUUAUGUAUGGAAAGAUAAGAAUAAAAUGACUACUAUUCUAGGUAUUC
AUCUUGUUUUACUAGGUCUUGGUGCUUUUCUCCUGGUAUUCAAGGCUUCAUUUUUCGGAGGUGUAUACGA
UACCUGGGCUCCUGGUGGUGGAGAUGUAAGAGAAAUCACAAAUCUUACACUUAGUCCGAGUAUUAUUUUU
GGGUAUUUACUCAAGUCACCUUUUGGUGGAGAGGGAUGGAUUGUUAGUGUGGAUAAUUUGGAAGAUAUAA
UCGGCGGACAUGUUUGGUUAGGCUUGAUUUGUAUCCUAGGUGGUAUCUGGCAUAUCUUGACCAAACCCUU
UGCGUGGGCCCGCCGUGCUUUAGUAUGGUCCGGAGAAGCCUAUCUAUCUUAUAGUUUAGGCGCUAUUUCU
GUUUUUGGUUUCAUUGCUUGUUGCUUUGUUUGGUUUAAUAACACAGCUUAUCCUAGUGAAUUUUAUGGUC
CUACUGGUCCAGAAGCUUCUCAAGCUCAAGCUUUUACUUUUUUGGUUAGAGACCAACGCCUCGGAGCUAA
UGUAGGUUCUGCCCAAGGACCUACCGGUUUAGGUAAAUAUCUUAUGCGCUCUCCUACUGGAGAAAUCAUU
UUUGGAGGAGAAACAAUGCGCUUUUGGGAUCUCCGUGCUCCAUGGUUGGAACCUCUAAGAGGUCCCAAUG
GCUUAGAUUUGAGUAAGUUGAAGCAAGAUAUACAGCCCUGGCAGGAGCGACGUUCCGCAGAAUAUAUGAC
UCAUGCUCCUUUGGGUUCUUUGAAUUCUGUAGGUGGAGUAGCUACUGAAAUUAAUGCAGUAAACUAUGUU
UCUCCCCGUAGUUGGUUAGCCACCUCUCAUUUUGUAUUGGGAUUCUUUUUUUUCGUAGGUCACUUGUGGC
ACGCCGGGAGAGCACGUGCAGCUGCAGCUGGAUUCGAAAAAGGGAUUGAUCGUGAUUCCGAACCUGUUCU
UUCUAUGACACCUCUUAACUAG