Chloroplast DB
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Gene View
 
ID   284
Gene name   ndhB
Locus   AnfoCp093
Organism   Anthoceros formosae
Location Start:End   158893:159615|160281:161060
 
Protein   
MKLDFGSFLSDGSSILPECILISSLIIILLIDLTSEKKTYWLYFISLTSLIISITVLLFQLKEEPIFSFS
GSFQTDGFNGIFRISIAFSSLLCIPLSMEYMKCTKMAITESLIFLLTATIGGMFLCGANDLIIIFITLEC
LSLSSYLLSGYTKKDVRSNEAAMKYLLMGGASSSILAYGFSWLYGLSGGKIQLQEIFNGLINTQMYNSTS
ISIVLIFIIAGIAFKLSLVPFHQWTPDVYEGAPTSVIAFFSVTSKIAGLALATRIFNTVFFSSLNEWHLI
LEIIAILSMILGNFIAITQTSMKRMLAYSSISQIGYFMIGVIAGDSNGYASMITYMLFYIFMNLGTFACI
TLFGLRTGTDNIRDYAGLYKKDPLLASFLALSLLSLGGIPPLAGFFGKLYLFWCGWKAGLYLSVSVGLFT
SVISIYYYLRIVKLIVTKENEETTSYIRKYKTSSNYLVSKSPIEFSIIICVIGSTFSGIVINPVIAIVEK
TISLSSFINN
    Run BLAST
 
CDS   
ATGAAATTAGATTTTGGTTCATTTTTATCAGATGGAAGTAGTATTTTACCAGAATGTATTTTAATTTCTA
GTTTAATTATCATTCTATTGATAGATCTAACCTCTGAAAAAAAGACATATTGGTTATATTTCATTTCATT
AACAAGTTTGATCATAAGTATAACTGTCCTGTTATTTCAATTAAAGGAAGAACCTATTTTTAGTTTCTCA
GGCAGTTTTCAAACAGACGGTTTTAATGGAATATTCCGAATCTCTATTGCATTTCCGTCACTTCTATGTA
TTCCCTTATCTATGGAATATATGAAATGTACAAAAATGGCGATTACTGAATCTTTAATTTTTTTGTTAAC
AGCTACTACAGGAGGAATGTTTTTATGCGGTGCTAATGATTTAATAATAATATTTATTACTCTAGAATGT
TTAAGTTTATCCTTCTATTTATTATCCGGATATACTAAGAAAGATGTATGATTCAATGAAGCTGCTATGA
AGTATTTACCTATGGGTGGAGCAAGTTCTCCCATTCTGGCTTATGGTTCTTCATGGTTATACGGTTTATC
TGGGGGGAAAATCCAACTTCAAGAGATTCTTAATGGTCTTATAAACACACAAATGTATAACTCTACAAGT
ATTTCGATCGTGCTTATATTTATTATTGCAGGAATCGCATTCAAACTTTCTTTAGTACCTTTTCATCAAT
GGACTCCTGATGTATATGAAGGAGCCCCTACCTCAGTCATTGCTTTCTTTTCTGTTACTTCAAAAATAGC
CGGTTTAGCTTTAGCTACTAGAATCTTCAACACAGTTTTTTTTTCATCACTGAACGAGTGGCATCTAATT
CTAGAAATAATAGCTATTCTAAGTATGATCTTAGGTAATTCTATTGCTATAACGCAAACAAGTATGAAAC
GTATGCTTGCATATTCTTTGATAAGTCAAATTGGATATTTTATGATTGGAGTAATTGCGGGAGACTCTAA
TGGGTATGCAAGCATGATAACTCACATGCTATTCTACATTCTTATGAATCTAGGAACTTTTGCTTGTATT
ACATTATTCGGTTTACGCACTGGAACGGACAACATTCGGGATTATGCAGGGTCATATAAAAAAGATCTTC
TATTGGCATCTTTTCCTGCTTTATCTTTATTATCCTTAGGAGGTATTCCTCCCTTAGCTGGGTTTTTCGG
AAAACCTTACCTCTCTTGGTGTGGGTGGAAAGCGGGTCTATACTTATCAGTCTCCGTAGGACTTTTCACA
AGTGTAATCTCTATATATTACTATTTACGAATAGTCAAATTGATTGTGACTAAGGAAAACGAAGAAACAA
CTTCTTATATTCGGAAGTATAAAACTTCTTTGAATTATTTAGTATCAAAAAGTCCTATTGAATTTAGTAT
CATTATATGTGTAATAGGATCAACCTCTTCGGGAATAGTGATTAACCCCGTCATTGCTATTGTTGAAAAA
ACAATATCTCTAAGTAGTTTTATTAATAACTAA
    Run BLAST
 
mRNA Edited   Edits at following locations: 265 C -> U 359 C -> U 434 U -> C 469 U -> C 473 U -> C 500 C -> U 520 C -> U 539 C -> U 589 C -> U 158 C -> U 206 U -> C 280 C -> U 298 C -> U 380 C -> U 395 U -> C 413 C -> U 473 C -> U 482 C -> U 638 U -> C 704 C -> U 

                     
                  
 
 
        
 Edited sequence 
AUGAAAUUAGAUUUUGGUUCAUUUUUAUCAGAUGGAAGUAGUAUUUUACCAGAAUGUAUUUUAAUUUCUA
GUUUAAUUAUCAUUCUAUUGAUAGAUCUAACCUCUGAAAAAAAGACAUAUUGGUUAUAUUUCAUUUCAUU
AACAAGUUUGAUCAUAAGUAUAACUGUCCUGUUAUUUCAAUUAAAGGAAGAACCUAUUUUUAGUUUCUCA
GGCAGUUUUCAAACAGACGGUUUUAAUGGAAUAUUCCGAAUCUCUAUUGCAUUUUCGUCACUUCUAUGUA
UUCCCUUAUCUAUGGAAUAUAUGAAAUGUACAAAAAUGGCGAUUACUGAAUCUUUAAUUUUUUUGUUAAC
AGCUACUAUAGGAGGAAUGUUUUUAUGCGGUGCUAAUGAUUUAAUAAUAAUAUUUAUUACUCUAGAAUGU
UUAAGUUUAUCCUCCUAUUUAUUAUCCGGAUAUACUAAGAAAGAUGUACGAUCCAAUGAAGCUGCUAUGA
AGUAUUUACUUAUGGGUGGAGCAAGUUCUUCCAUUCUGGCUUAUGGUUUUUCAUGGUUAUACGGUUUAUC
UGGGGGGAAAAUCCAACUUCAAGAGAUUUUUAAUGGUCUUAUAAACACACAAAUGUAUAACUCUACAAGU
AUUUCGAUCGUGCUUAUAUUUAUUAUUGCAGGAAUCGCAUUCAAACUUUCUUUAGUACCUUUUCAUCAAU
GGACUCCUGAUGUAUAUGAAGGAAUGAAAUUAGAUUUUGGUUCAUUUUUAUCAGAUGGAAGUAGUAUUUU
ACCAGAAUGUAUUUUAAUUUCUAGUUUAAUUAUCAUUCUAUUGAUAGAUCUAACCUCUGAAAAAAAGACA
UAUUGGUUAUAUUUCAUUUCAUUAACAAGUUUGAUCAUAAUUAUAACUGUCCUGUUAUUUCAAUUAAAGG
AAGAACCUAUUUUUAGUUCCUCAGGCAGUUUUCAAACAGACGGUUUUAAUGGAAUAUUCCGAAUCUCUAU
UGCAUUUCCGUCACUUCUAUGUUUUCCCUUAUCUAUGGAAUAUAUGAAAUGUACAAAAAUGGCGAUUACU
GAAUCUUUAAUUUUUUUGUUAACAGCUACUACAGGAGGAAUGUUUUUAUGCGUUGCUAAUGAUUUAACAA
UAAUAUUUAUUACUCUAGAAUGUUUAAGUUUAUCCUUCUAUUUAUUAUCCGGAUAUACUAAGAAAGAUGU
AUGAUUCAAUGAAGUUGCUAUGAAGUAUUUACCUAUGGGUGGAGCAAGUUCUCCCAUUCUGGCUUAUGGU
UCUUCAUGGUUAUACGGUUUAUCUGGGGGGAAAAUCCAACUUCAAGAGAUUCUUAAUGGUCUUAUAAACA
CACAAAUGUAUAACUCUACAAGUAUUUCGACCGUGCUUAUAUUUAUUAUUGCAGGAAUCGCAUUCAAACU
UUCUUUAGUACCUUUUCAUCAAUGGAUUCCUGAUGUAUAUGAAGGAGCCCCUACCUCAGUCAUUGCUUUC
UUUUCUGUUACUUCAAAAAUAGCCGGUUUAGCU