Chloroplast DB
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Gene View
 
ID   275
Gene name   ccsA
Locus   AnfoCp079
Organism   Anthoceros formosae
Location Start:End   128424:129443
 
Protein   
MILINLEHILAHISFFLPFLATLVFWGRIVCIDNKRIGSLGNKSIIIAYICITGLLLTRWFHSRHLLLSN
LYESFMFLSWSFCLIHIVSEIGSKNDWLGIIIVLIAMLTHGFATVGLPIEMQQSTVLVPALQSHWLIMHV
SMMIPSYATLPCGSLLVIALLITTLNKNKNFPILKFNVNSFIWSLILEKKFYLGGSGGDISSRNSSSGNG
SDNDSNNNNNKKTFHSLSIDCRKLQLTQQLDYWSYRIISLGSLFLTIGILSGAVWVNEAWGSYWSWDPKE
TWALITWLLSAIHIHIRMIRGWQGEKPAIIASSGSSIVWFRYLGVNSPEKGLHSYGWLN
    Run BLAST
 
CDS   
ACGATATTAATAAATCTAGAACATATATTAGCTCATATTCCTTTCTTTCTTCCTTTTCTCGCAACTTTGG
TTTTTTGGGGAAGAATTGTTTGTATAGACAATAAAAGAATAGGTTCTTTAGGTAATAAAAGCATAATAAT
CGCTTATATTTGTATAACGGGGCTTCTACTGACTCGCCGGTTCCATCCTAGACACTTACTGCTAAGTAAT
CTATATGAATCTTTTATGTTTCTTTCATGGAGTTTTTGTTTGATTCACATAGTTTCAGAAATCGGAAGTA
AAAATGATTGGTTAGGTATCATCATTGTACTGATTGCTATGTTAACCCATGGTTTTGCTACTGTGGGTCT
CCCCATAGAGATGCAACAATCTACAGTTTTAGTACCTGCCTCACAATCTCATTGGTTAATAATGCACGTA
AGTATGATGATACCTAGTTATGCCACTCTTCCATGTGGATCTTTATTAGTAATAGCTTTGTCAATTACTA
CGTTAAATAAAAATAAAAATTTTCCTATATTAAAATTTAACGTAAATTCATTTATTTGGTCTCTAATTTT
GGAAAAGAAATTTTATTTAGGAGGAAGTGGTGGAGATATAAGTAGTAGGAATAGCAGTAGTGGTAATGGG
AGTGATAATGATAGTAATAATAATAATAATAAAAAGACTTTTCATTCGCTATCTATAGATTGTCGTAAAT
TGCAATTAACTTAATAGTTGGATTATTGGAGTTATCGAATTATTAGTTTAGGTTCTTCGTTTTTAACTAT
AGGTATTCTCTCTGGAGCAGTATGGGTTAATGAAGCTTGGGGATCTTACTGGAGTTGGGATCCTAAGGAA
ACTTGGGCTTTAATTACTTGGCTTCTATCTGCAATTCATATACATATCAGAATGATTAGGGGTTGGCAGG
GTGAAAAACCAGCAATTATAGCGTCTTCAGGATCTTCTATAGTTTGGTTTCGCTACTTAGGAGTCAACTC
CCCTGAAAAAGGTTTGCATAGTTATGGCTGGTTAAATTGA
    Run BLAST
 
mRNA Edited   Edits at following locations: 2 C -> U 40 C -> U 178 C -> U 187 C -> U 392 C -> U 482 C -> U 712 U -> C 715 U -> C 758 C -> U 

                     
                  
 
 
        
 Edited sequence 
AUGAUAUUAAUAAAUCUAGAACAUAUAUUAGCUCAUAUUUCUUUCUUUCUUCCUUUUCUCGCAACUUUGG
UUUUUUGGGGAAGAAUUGUUUGUAUAGACAAUAAAAGAAUAGGUUCUUUAGGUAAUAAAAGCAUAAUAAU
CGCUUAUAUUUGUAUAACGGGGCUUCUACUGACUCGCUGGUUCCAUUCUAGACACUUACUGCUAAGUAAU
CUAUAUGAAUCUUUUAUGUUUCUUUCAUGGAGUUUUUGUUUGAUUCACAUAGUUUCAGAAAUCGGAAGUA
AAAAUGAUUGGUUAGGUAUCAUCAUUGUACUGAUUGCUAUGUUAACCCAUGGUUUUGCUACUGUGGGUCU
CCCCAUAGAGAUGCAACAAUCUACAGUUUUAGUACCUGCCUUACAAUCUCAUUGGUUAAUAAUGCACGUA
AGUAUGAUGAUACCUAGUUAUGCCACUCUUCCAUGUGGAUCUUUAUUAGUAAUAGCUUUGUUAAUUACUA
CGUUAAAUAAAAAUAAAAAUUUUCCUAUAUUAAAAUUUAACGUAAAUUCAUUUAUUUGGUCUCUAAUUUU
GGAAAAGAAAUUUUAUUUAGGAGGAAGUGGUGGAGAUAUAAGUAGUAGGAAUAGCAGUAGUGGUAAUGGG
AGUGAUAAUGAUAGUAAUAAUAAUAAUAAUAAAAAGACUUUUCAUUCGCUAUCUAUAGAUUGUCGUAAAU
UGCAAUUAACUCAACAGUUGGAUUAUUGGAGUUAUCGAAUUAUUAGUUUAGGUUCUUUGUUUUUAACUAU
AGGUAUUCUCUCUGGAGCAGUAUGGGUUAAUGAAGCUUGGGGAUCUUACUGGAGUUGGGAUCCUAAGGAA
ACUUGGGCUUUAAUUACUUGGCUUCUAUCUGCAAUUCAUAUACAUAUCAGAAUGAUUAGGGGUUGGCAGG
GUGAAAAACCAGCAAUUAUAGCGUCUUCAGGAUCUUCUAUAGUUUGGUUUCGCUACUUAGGAGUCAACUC
CCCUGAAAAAGGUUUGCAUAGUUAUGGCUGGUUAAAUUGA