Chloroplast DB - View Gene

Chloroplast DB

Gene View

272

Gene name

atpF

Locus

AnfoCp010

Organism

Anthoceros formosae

Location Start:End

17318:17462|18210:18619

Protein

MRNLIFFVIPFHFWLPAEGFKLNTNLLETNLINLGVVLGLLVYFGKGVLNNLLDKRKQTILSTIRDAEER
YKEATDKLKQAQIRLQQAELKANEIRVNGLSEMEKEKQDLINIADEDSKRLEDSKNATIRFEEQRAIEQV
RQQVSRLALERASEVLNNCLNSELHSRMIDYHIGLLKTMGSTTE

Run BLAST

CDS

ATGAGAAATTTGATTTCTCTTGTTATTCCTTTTCATTTTTGGCTTCCTGCAGAGGGTTTTAAACTAAATA
CAAATCTTTTAGAAACAAATTTAATCAATTTAGGTGTTGTGCTTGGTTTATTAGTTTACTTTGGAAAGGG
AGTGTTAAATAATTTATTAGATAAGCGTAAACAGACGATTTTAAGTACTATTCGCGATGCAGAGGAACGG
TATAAAGAAGCTACTGATAAACCTAAACAAGCCCAGATTCGTTTGCAACAAGCTGAATTAAAAGCAAATG
AAATTCGAGTCAATGGACTTTCTGAAATGGAAAAAGAAAAACAGGATTTAATTAATATTGCTGATGAAGA
TTCAAAACGTTTAGAAGATTCTAAAAATGCTACTATTCGTTTCGAAGAACAGAGAGCAATTGAGTAAGTT
AGACAACAGGTTTCTCGTCTCGCATTAGAAAGAGCTTCAGAAGTTTCAAACAATTGTTTAAATAGCGAAT
TGCATTCACGCATGATTGACTATCATATTGGTCTGCTTAAGACCATGGGAAGCACAACTGAATAG

Run BLAST

mRNA Edited

Edits at following locations: 17 C -> U 19 C -> U 90 U -> C 68 U -> C 88 C -> U 270 U -> C 322 C -> U

Edited sequence

AUGAGAAAUUUGAUUUUUUUUGUUAUUCCUUUUCAUUUUUGGCUUCCUGCAGAGGGUUUUAAACUAAAUA CAAAUCUUUUAGAAACAAACUUAAUCAAUUUAGGUGUUGUGCUUGGUUUAUUAGUUUACUUUGGAAAGGG AGUGUAUGAGAAAUUUGAUUUCUCUUGUUAUUCCUUUUCAUUUUUGGCUUCCUGCAGAGGGUUUUAAACU AACUACAAAUCUUUUAGAAACAUAUUUAAUCAAUUUAGGUGUUGUGCUUGGUUUAUUAGUUUACUUUGGA AAGGGAGUGUUAAAUAAUUUAUUAGAUAAGCGUAAACAGACGAUUUUAAGUACUAUUCGCGAUGCAGAGG AACGGUAUAAAGAAGCUACUGAUAAACCUAAACAAGCCCAGAUUCGUUUGCAACAAGCUGAAUUCAAAGC AAAUGAAAUUCGAGUCAAUGGACUUUCUGAAAUGGAAAAAGAAAAAUAGGAUUUAAUUAAUAUUGCUGAU GAAGAUUCAAAACGUUUAGAAGAUUCUAAAAAUGCUACUAUUCGUUUCGAAGAACAGAGAGCAAU